csd3
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10. Parallel Computing
11. QEMU
12. SRCP
13. Green Algorithms
14. Training
15. Contacts
16. Acknowledgement
17. Setup of modules
/systems/files/
Rust/nightly
Python packages
1. BitNet
2. C2S-Scale
3. delphi (aka delphi-2M)
4. DrugAssist
5. gwas2vcf
6. GWAS Catalog
7. hail
8. hap.py
9. InstaNovo
10. ldsc
11. mity
12. PhySO
13. scGPT
14. Scikit-LLM & OpenAI API
15. snakemake
16. Sniffles
17. Synapse
R packages
1. brms
2. conquer
3. DescTools
4. EasyQC
5. geometries
6. gifski
7. git2r
8. glmnet
9. gnn
10. gsl
11. igraph
12. jqr
13. LDlinkR
14. lpsymphony
15. magick
16. METRO
17. nloptr
18. PhenoScanner
19. PKI
20. plumber
21. proj4
22. protolite
23. rawrr
24. RcppTOML
25. Rfast
26. rgdal
27. rgeos
28. rgl
29. Rhdf5lib
30. rjags
31. rJava
32. RMariaDB
33. rstan
34. rtracklayer
35. SAIGE
36. sf
37. snpnet
38. sojo
39. SPACox
40. tenXplore
41. xlsx
Applications
1. ABCtoolbox
2. AEGIS
3. akt
4. angsd
5. ANNOVAR
6. AnythingLLM Desktop
7. aria2
8. awscli
9. bcftools
10. bedops
11. bgenix
12. CaVEMaN
13. CAVIAR/eCAVIAR
14. circos
15. citeproc
16. cli
17. CLUES2
18. CookHLA
19. crux
20. Cytoscape
21. DNAnexus
22. docker
23. DosageConverter
24. finemap
25. Firefox
26. fresh
27. fsc2
28. GATK
29. gcloud
30. GCTA
31. geany
32. gemini-cli
33. Genotype-Harmonizer
34. git
35. gsutil
36. haplogrep
37. hapstat
38. HESS
39. KentUtils
40. lapack
41. LEMMA
42. llama.cpp
43. LocusZoom
44. METAL
45. MetaXcan
46. miniforge3
47. MitoScape
48. MToolBox
49. node
50. ollama
51. OpenMS
52. pandoc
53. PCA projection
54. peer
55. pgsc_calc
56. PLINK
57. podman
58. polyphen-2
59. poppler
60. postman
61. PRSice
62. PRSoS
63. pspp
64. qemu
65. qpdf
66. qtltools
67. qt
68. quarto
69. regenie
70. Relate
71. R
72. RStudio
73. Rust
74. selscan
75. SEQPower
76. shapeit
77. SMR
78. snipar
79. SNPTEST
80. sra-tools
81. SurvivalGWAS_SV
82. tabix
83. tesseract
84. VEP
85. Visual Studio code
86. Notes on emsembl-vep
/applications/files/
precision-medicine-deepseek-r1.md
/applications/files/examples/
cardio
csd3
R
gifski.md
gifski
1.12.0-2
This requires
ceuadmin/rust/1.74.1
.
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2019-2025,
cambridge-ceu
Revision
802f915
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