csd3
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9. ceuadmin
10. Parallel Computing
11. QEMU
12. SRCP
13. Green Algorithms
14. A. Setup of modules
15. Training
16. Contacts
17. Acknowledgement
/systems/files/
Python packages
1. gwas2vcf
2. GWAS Catalog
3. ldsc
4. PhySO
5. Scikit-LLM & OpenAI API
6. snakemake
7. Synapse
R packages
1. brms
2. conquer
3. DescTools
4. EasyQC
5. geometries
6. gifski
7. git2r
8. glmnet
9. gnn
10. gsl
11. igraph
12. jqr
13. LDlinkR
14. lpsymphony
15. magick
16. METRO
17. nloptr
18. PhenoScanner
19. PKI
20. plumber
21. protolite
22. rawrr
23. RcppTOML
24. Rfast
25. rgdal
26. rgeos
27. rgl
28. Rhdf5lib
29. rjags
30. rJava
31. RMariaDB
32. rstan
33. rtracklayer
34. SAIGE
35. sf
36. snpnet
37. sojo
38. SPACox
39. tenXplore
40. xlsx
Applications
1. ABCtoolbox
2. AEGIS
3. akt
4. ANNOVAR
5. aria2
6. bcftools
7. bedops
8. bgenix
9. CaVEMaN
10. CAVIAR/eCAVIAR
11. circos
12. citeproc
13. CookHLA
14. Cytoscape
15. DNAnexus
16. DosageConverter
17. finemap
18. GATK
19. GCTA
20. geany
21. Genotype-Harmonizer
22. git
23. gsutil
24. hail
25. HESS
26. KentUtils
27. lapack
28. LEMMA
29. LocusZoom
30. METAL
31. MetaXcan
32. ollama
33. pandoc
34. PCA projection
35. peer
36. pgsc_calc
37. PLINK
38. polyphen-2
39. poppler
40. PRSice
41. PRSoS
42. pspp
43. OpenMS
44. qpdf
45. qtltools
46. qt
47. quarto
48. regenie
49. R
50. RStudio
51. Rust
52. shapeit
53. SMR
54. snipar
55. SNPTEST
56. sra-tools
57. SurvivalGWAS_SV
58. tabix
59. VEP
60. Visual Studio code
61. B. Notes on emsembl-vep
/applications/files/
/applications/files/examples/
cardio
csd3
R
gifski.md
gifski
1.12.0-2
This requires
ceuadmin/rust/1.74.1
.
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2019-2025,
cambridge-ceu
Revision
a81fa0a
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