Policies
See https://docs.hpc.cam.ac.uk/hpc/user-guide/policies.html#acknowledging-csd3.
- 1. System
- 2. Policies
- 3. Login
- 4. Directories
- 5. email
- 6. Web browsing
- 7. Languages
- 8. Software
- 9. ceuadmin
- 10. Parallel Computing
- 11. QEMU
- 12. SRCP
- 13. Green Algorithms
- 14. Training
- 15. Contacts
- 16. Acknowledgement
- 17. Setup of modules
- /systems/files/
- 1. BitNet
- 2. C2S-Scale
- 3. DrugAssist
- 4. gwas2vcf
- 5. GWAS Catalog
- 6. hail
- 7. hap.py
- 8. InstaNovo
- 9. ldsc
- 10. mity
- 11. PhySO
- 12. scGPT
- 13. Scikit-LLM & OpenAI API
- 14. snakemake
- 15. Sniffles
- 16. Synapse
- 1. brms
- 2. conquer
- 3. DescTools
- 4. EasyQC
- 5. geometries
- 6. gifski
- 7. git2r
- 8. glmnet
- 9. gnn
- 10. gsl
- 11. igraph
- 12. jqr
- 13. LDlinkR
- 14. lpsymphony
- 15. magick
- 16. METRO
- 17. nloptr
- 18. PhenoScanner
- 19. PKI
- 20. plumber
- 21. proj4
- 22. protolite
- 23. rawrr
- 24. RcppTOML
- 25. Rfast
- 26. rgdal
- 27. rgeos
- 28. rgl
- 29. Rhdf5lib
- 30. rjags
- 31. rJava
- 32. RMariaDB
- 33. rstan
- 34. rtracklayer
- 35. SAIGE
- 36. sf
- 37. snpnet
- 38. sojo
- 39. SPACox
- 40. tenXplore
- 41. xlsx
- 1. ABCtoolbox
- 2. AEGIS
- 3. akt
- 4. angsd
- 5. ANNOVAR
- 6. AnythingLLM Desktop
- 7. aria2
- 8. awscli
- 9. bcftools
- 10. bedops
- 11. bgenix
- 12. CaVEMaN
- 13. CAVIAR/eCAVIAR
- 14. circos
- 15. citeproc
- 16. cli
- 17. CLUES2
- 18. CookHLA
- 19. crux
- 20. Cytoscape
- 21. DNAnexus
- 22. docker
- 23. DosageConverter
- 24. finemap
- 25. firefox
- 26. fsc2
- 27. GATK
- 28. GCTA
- 29. geany
- 30. Genotype-Harmonizer
- 31. git
- 32. gsutil
- 33. haplogrep
- 34. hapstat
- 35. HESS
- 36. KentUtils
- 37. lapack
- 38. LEMMA
- 39. llama.cpp
- 40. LocusZoom
- 41. METAL
- 42. MetaXcan
- 43. miniforge3
- 44. MitoScape
- 45. MToolBox
- 46. node
- 47. ollama
- 48. OpenMS
- 49. pandoc
- 50. PCA projection
- 51. peer
- 52. pgsc_calc
- 53. PLINK
- 54. podman
- 55. polyphen-2
- 56. poppler
- 57. PRSice
- 58. PRSoS
- 59. pspp
- 60. qemu
- 61. qpdf
- 62. qtltools
- 63. qt
- 64. quarto
- 65. regenie
- 66. Relate
- 67. R
- 68. RStudio
- 69. Rust
- 70. selscan
- 71. SEQPower
- 72. shapeit
- 73. SMR
- 74. snipar
- 75. SNPTEST
- 76. sra-tools
- 77. SurvivalGWAS_SV
- 78. tabix
- 79. tesseract
- 80. VEP
- 81. Visual Studio code
- 82. Notes on emsembl-vep
- /applications/files/