shapeit

shapeit5

Module ceuadmin/shapeit5/5.1.1 is available. See https://odelaneau.github.io/shapeit5/.

shapeit4

See https://odelaneau.github.io/shapeit4/.

shapeit3

Web: https://jmarchini.org/shapeit3/.

Module ceuadmin/shapeit/3 is available. It could be directly used with download from Dropbox; one executable requires boost 1.60.

./shapeit3.r884.1
module load boost/1.60/gcc-5.2.0-python-2.7.10
./shapeit3.r884.2

shapeit2

Module ceuadmin/shapeit/2.r790 is available.