PRSice

Web page: https://github.com/choishingwan/PRSice and https://choishingwan.github.io/PRSice/.

Installation

cd $HPC_WORK
git clone https://github.com/choishingwan/PRSice
cd PRSice
mkdir build
cd build
module load cmake/3.9
cmake ..
make
ln -sf $HPC_WORK/PRSice/bin/PRSice $HPC_WORK/bin/PRSice
wget https://github.com/choishingwan/PRS-Tutorial/raw/master/resources/GIANT.height.gz
wget -qO- https://github.com/choishingwan/PRS-Tutorial/raw/master/resources/EUR.zip | jar xv
 

The last two commands download/unpack the documentation example, which is described here, https://choishingwan.github.io/PRS-Tutorial/, whose scripts are partly extracted here.

Module

module load ceuadmin/PRSice